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Dear Admins,
I've installed VirtualBox and am now at the stage of extracting the
7zip Ubuntu image that includes freesurfer. Could you please send the
password for extracting this encrypted file?
Thanks,
Dakota
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Hi Dr Greeve,
I ran recon-all using the flag -flair. I couldn't find any command in
recon-all.log that normalizes the flair images. It seems just normalization
to the T1.
I would like to inquire about the flag sigma in the command "mri_normalize"
the
One more note:
The command:
export SUBJECTS_DIR=/home/ylee6/ADIPA_data
May or may not work, depending on the type of shell environment you are using.
If it doesn't work, you can try:
setenv SUBJECTS_DIR /home/ylee6/ADIPA_data
To set the environment variable
-Paul
Hi Justina,
Ok so on your computer, the subjects are located in /home/ylee6/ADIPA_data, but
the SUBJECTS_DIR environment variable is set to
/usr/local/freesurfer/7.3.2/subjects.
There are two ways we can fix this.
1) We can change the SUBJECTS_DIR environment variable and then run
