Re: [Freesurfer] Longitudinal FS pipeline consistently interrupts at -Sphere for all participants

2022-11-02 Thread fsbuild
External Email - Use Caution One way we’ve seen recon-all eventually fail running on Linux hosted on Windows is whatever is virtualizing Linux to run on top of the Windows OS - simply runs out of memory at some point in the processing pipeline.  That can result in a message in t

[Freesurfer] Option -contrasurfreg in FreeSurfer 7.3.2

2022-11-02 Thread Francois Tadel, Mr [Affiliate]
External Email - Use Caution Dear colleagues, The step "contrasurfreg" is still documented for recon-all: https://secure-web.cisco.com/1sNdAy_WhD93Ud31GJEbFbtzD8zuHWnO6zQotNCGvSLXYBnsj70xmme0khmMoGGx6jFfavCRc26xIsEkjL7KPZUbJKuREIjf4QlNxdCxG-f4Wnh6mxDgIYiTMSZdVRD7vCIvRw54tQfezC39lG