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Hi,
I am interested in the aparc+aseg stats for the subcallosal
cinuglate cortex (SCC). When learning freesurfer, the lectures/tutorials
mention not to make manual edits to medial structures which I believe would
include the SCC.
Will the stat output
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Paul,
That's super helpful and very much appreciated. The template source is
definitely helpful!
On Thu, Apr 6, 2023 at 11:57 AM Wighton, Paul wrote:
>
> Hi Bennet,
>
> I've been doing my best to support building FreeSurfer containers via
>
Hi Bennet,
I've been doing my best to support building FreeSurfer containers via
neurodocker (https://github.com/ReproNim/neurodocker).
This template should give you a good idea of the pre-reqs for a FreeSurfer
container.
ah, I see. OK, I've fixed this in dev.
On 4/4/2023 4:59 PM, Christopher Markiewicz wrote:
> External Email - Use Caution
>
> Hi Doug,
>
> Sorry for the delay. CAReg shows up, but not GCAReg:
>
> $ grep -A6 "case .-autorecon2-volonly" $FREESURFER_HOME/bin/recon-all
> case
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The Cognition and Brain Circuitry Laboratory at the Ohio State University is
recruiting a research assistant. Primary duties include: conducting
neuroscience research on the functional and structural architecture of the
human brain, and its role in
You can, but you need to give mri_glmfit the specific label to use as a
mask (eg, --label or --mask). You can extract labels from an annot with
mri_annotation2label. Then mri_glmfit-sim will automatically restrict
the correction to that label
On 4/6/2023 10:05 AM, John Anderson wrote:
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Dear Dr Greve,
Apologize for not providing a clear explanation earlier. The file
lh.all.suvr.sm05.proj0.5.nii.gz is the result of combining all SUVR maps,
using mri_concat, after projecting them onto the brain surface with
mri_vol2surf.
I would like to
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In reply to mail from Mitchell Horn, Douglas Greve replied
> The math libraries changed between 7 and 8, nothing we can do about it. When I
> have to run things on a centos8 machine, I generally run in a centos7
> singularity
> container (which we
