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Hi Bruce,
Cool! Thank you so much.
Best wishes,
Hamied
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Fischl, Bruce R.,PHD
Sent: Tuesday, June 27, 2023 8:29 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Longitudinal struct
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It looks like you started recon-all by copying in mri/orig/001.mgz. I saw
multiple runs of recon-all that were run on top of each other.
Can you try to restart clean by providing the input on the command line
‘recon-all -s -I -all’?
Best,
Yujing
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Hi
I have made custom labels to use as ROIs,
I was wondering if there was any way to get thickness values at each vertex for
a participant but just within the areas covered by specific label files,
So from the lh.thickness.fwhm0.fsaverage.mgh file,
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A few quick questions FS experts.
I made manual edits on subcortical structures in outputs from FS6.0.
Specifically, I made the edits on the aseg.presurf.mgz file. I then reran using:
recon-all -s neo267e_nil -autorecon2-noaseg -autorecon3
Do the upd
