[Freesurfer] Identifying meridia in retinotopic maps

othing makes it look better, but even with 10mm of smoothing, it's unclear if the fieldsigns are correct. How can I track down the problems with the fieldsign maps? Thanks in advance! --Greg ________ Greg Burgess, Ph.D. St

[Freesurfer] mkanalysis-sess gui

, --Greg Greg Burgess, Ph.D. Staff Scientist, Human Connectome Project Washington University School of Medicine Department of Anatomy and Neurobiology Email: burge...@pcg.wustl.edu

Re: [Freesurfer] Cutting closed line for flat map

Greg Burgess, Ph.D. Staff Scientist, Human Connectome Project Washington University School of Medicine Department of Anatomy and Neurobiology Email: burge...@pcg.wustl.edu On Mar 23, 2012, at 9:51 AM, Bruce Fischl wrote: > Hi Greg > > do you see this on all your datasets? I don

[Freesurfer] Cutting closed line for flat map

rcle around the medial wall. I've tried putting cut points so close that they're nearly on top of each other, but it still doesn't help. Does anyone have an idea why this won't cut right? Thanks, --Greg ________ Greg Bu

Re: [Freesurfer] dimension mismatch in fieldsign-sess

wrote: > Did you happen to change the surface for your subject between the time you > ran preprocessing and the time you ran fieldsign-sess? It looks like the > number of vertices changed. > doug > > Greg Burgess wrote: >> Hi freesurfers, >> >> I'm gettin

[Freesurfer] dimension mismatch in fieldsign-sess

ke all -dontrun recon-all -vno-check -s CP10021_v5 but no issues are reported, and I can't find any issues in the log files or output. Can anyone suggest a next step? Thanks, --Greg ________ Greg Burgess, Ph.D. Staff Scienti

Re: [Freesurfer] please help, unsupported slice timing

following magic: fslmaths /PATH/TO/IMAGE.nii /PATH/TO/IMAGE.nii A potentially better long-term fix is to switch dicom to nifti converters. We've been having success with dcm2nii, which is part of mricron. Good luck, --Greg ______