Re: [Freesurfer] nonlinear models in longitudinal analysis

2014-05-12 Thread Jodie Davies-Thompson
is different from zero ( 0 1 1, ie the sum of the last two columns). Best, Martin On 05/08/2014 03:48 PM, Jodie Davies-Thompson wrote: > Dear Freesurfer experts, > > I am attempting to do a longitudinal analysis of cortical thickness with 3 > timepoints. So far, I hav

[Freesurfer] nonlinear models in longitudinal analysis

2014-05-08 Thread Jodie Davies-Thompson
ec file be: a) fsid fsid-base years day1 base 0 day2 base 3 day3 base 3 and b) fsid fsid-base years day1 base 0 day2 base 0 day3 base 3 All the best, Jodie - --- Jodie Davies-Thompson, Postdoctoral Fellow Department of Ophthalmology & Visual Sciences UBC/VGH Eye Care Centre 2550 Willow Street

[Freesurfer] diluting a mask using inflated brain

2013-01-29 Thread Jodie Davies-Thompson
!? Does anyone know how to do this or could point us in the right direction? Cheers, Jodie - --- Jodie Davies-Thompson, Postdoctoral Fellow Department of Ophthalmology & Visual Sciences UBC/VGH Eye Care Centre 2550 Willow Street Vancouver, BC, V5Z 3N9 Canada Tel: 604-875-4111 ext 6

Re: [Freesurfer] mkcontrasts & retinotopy cannot find eccen error

2011-10-13 Thread Jodie Davies-Thompson
h "-a 1 -a 2 -a 3 -a 4". This will just add all of them together. doug Jodie Davies-Thompson wrote: Dear FreeSurfers, I am new to Freesurfer and attempting to run a very basic analysis, but am finally stuck after trying 3 alternative ways of displaying the data. Any help would be greatly

[Freesurfer] mkcontrasts & retinotopy cannot find eccen error

2011-10-12 Thread Jodie Davies-Thompson
#x27; file. Any ideas? At the moment I have no way of displaying my data, and I'm going round in circles, so any suggestions would be great! Thanks in advance, Jodie -- Jodie Davies-Thompson, Postdoctoral Fellow Department of Ophthalmology& Visual Sciences UBC/VGH Eye Care Centre 2550 Wi

[Freesurfer] Cut plane feature in tksurfer

2011-10-07 Thread Jodie Davies-Thompson
lution. Can anyone advise on this? Regards, Jodie http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg14612.html http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg16303.html -- Jodie Davies-Thompson, Postdoctoral Fellow Department of Ophthalmology& Visual Sciences UBC/V