Dear Freesurfer team,
We are analyzing the gray matter volume of some customized labels, using
mris_anatomical_stats.
We are wondering about some characteristics of the obtained volume.
Is the volume of a label (as calculated by mris_anatomical_stats) the sum of
the volume elements of each
Dear Freesurfer team,
I am working with calculated volumes of a gyrus (a costumized label).
I currently use mris_anatomical_stats to calculate the volumes of my gyrus (in
label format).
According to the freesurfer tutorial (as I understood), one of the stats
outputted from
-boun...@nmr.mgh.harvard.edu> on behalf of Douglas Greve
<gr...@nmr.mgh.harvard.edu>
Sent: Friday, October 14, 2016 7:01 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] Quantifying volumes
How did you create the label ?
On 10/14/16 12:43 PM, Josue Luiz Dalboni Da Rocha wrote:
vert a .cuvr file to a .label file ?
Thank you and best,
Damien
Josue Luiz Dalboni Da Rocha Wed, 12 Oct 2016 07:26:32 -0700
Dear Doug,
Thank you very much for your advice!
We get to extract results for the volumes from a ".curv file encoded ROI" using
your recommended comma
gh --id 1 --i lh.volume
--accumulate --sum lh.vol.yourcurv.sum
On 10/05/2016 09:09 AM, Josue Luiz Dalboni Da Rocha wrote:
> Dear Douglas,
>
> I have a ".curv" file that contains the curvature information inside an
> automatically delineated ROI and 0 everywhere else.
> I wou
, October 4, 2016 9:41 PM
> To: freesurfer@nmr.mgh.harvard.edu
> Subject: Re: [Freesurfer] Quantifying volumes
>
> What is the nature of the segmentation? Is it just a binary (1=in,
> 0=out) segmentation? And what file format? In general we don't use .w
> anymore, but it can
ying volumes
What is the nature of the segmentation? Is it just a binary (1=in,
0=out) segmentation? And what file format? In general we don't use .w
anymore, but it can be converted into something else.
doug
On 10/03/2016 12:35 PM, Josue Luiz Dalboni Da Rocha wrote:
>
> Dear Douglas,
>
&g
Dear Douglas,
I have a segmented gyrus curvature file (.curv or .w) and I would like to
calculate the volume (and other statistics) of this gyrus.
I currently only know mris_anatomical_stats to perform that, but requiring a
'.label' file.
Can I extract statistics directly from the ".curv"
