[Freesurfer] Spatial smoothing for cortical folding measures

2019-11-13 Thread huyang
External Email - Use Caution Dear FS experts, Is it necessary to do spatial smoothing for cortical folding measures (curv/sulc/smoothwm.FI.crv/pial_lgi, etc.)? These cortical folding measures are inherently smooth based on the computation methods used. If spatial smoothing is

[Freesurfer] Convert Yeo's 17-network confidence map into MNI152 volumetric space

2019-04-01 Thread huyang
External Email - Use Caution Dear FreeSurfer experts and users, I would like to convert Yeo's 17-network confidence map into MNI152 volumetric space and I tried the following commands (but failed): (1) mri_surf2vol --so $SUBJECTS_DIR/fsaverage/surf/lh.white $SUBJECTS_DIR/fsave