Thanks Douglas.
Thank you for your help. I have another question.
Is there a way to get 'nuisance factors adjusted' values using FreeSurfer?
Do I have to use other software (Matlab etc.) to get adjusted values?
Best Regards,
Hiroki
On Thu, 19 Jan 2017 15:08:49 -0500, Douglas N Greve
wrote:
>
Those will not be adjusted for nuisance values
On 01/18/2017 06:59 PM, hiroki.s...@med.tohoku.ac.jp wrote:
> Thanks Douglas.
> My command lines are
>
> 'mri_surfcluster --in
> /Volumes/My_Book_Thunderbolt_Duo/subjects_DCNTDC/qdec/Untitled/rh-Diff-WT-Hetero-Intercept-thickness/sig.mgh
> --thmin -
Thanks Douglas.
My command lines are
'mri_surfcluster --in
/Volumes/My_Book_Thunderbolt_Duo/subjects_DCNTDC/qdec/Untitled/rh-Diff-WT-Hetero-Intercept-thickness/sig.mgh
--thmin --subject fsaverage --hemi rh --ocn
ocn.mgh'
'mri_segstats --i
/Volumes/My_Book_Thunderbolt_Duo/subjects_DCNTDC/qdec/Unt
what are your command lines?
On 01/18/2017 01:39 AM, hiroki.s...@med.tohoku.ac.jp wrote:
> Dear experts,
>
> I have some questions.
> I did Qdec group analysis with three nuisance factors. And one region
> remained after FDR correction.
> Then I did 'mri_surfcluster' specifying the FDR-determined
Dear experts,
I have some questions.
I did Qdec group analysis with three nuisance factors. And one region
remained after FDR correction.
Then I did 'mri_surfcluster' specifying the FDR-determined voxel-wise
threshold as the --thmin.
After that I ran 'mri_segstats' and got the values.
1)Are these
