Dear experts,
I had to make volumic statistical analysis for the need to use BPM toolbox.
So, I got in the output of this statistical analysis some volumic Tmaps.
As I did before some group analysis according to FStutorial, I would like
to apply the same method of Clusterwise Correction on my vol
If you did the analysis in the volume, then you have to do the
clusterwise correction in the volume.
On 4/13/15 6:05 AM, Matthieu Vanhoutte wrote:
Dear experts,
I had to make volumic statistical analysis for the need to use BPM
toolbox. So, I got in the output of this statistical analysis som
Hello Douglas,
Thanks but even if I do the clusterwise correction in the volume, I can't
get an clusterwise corrected output volume image. The only things I have
are the Tmaps that I can threshold if wanted.
And I would like to project on fsaverage surface the results of the
clusterwise correctio
Does the BPM toolbox (what's that?) not give you cluster correction? You
can try using mri_volcluster with the --grf option, but you'll need to
know the FWHM. Afterwards you can map the result to the surface
On 4/13/15 10:46 AM, Matthieu Vanhoutte wrote:
Hello Douglas,
Thanks but even if I do
By the mean of SPM, the Biological Parmatring toolbox can do the FWE
correction and give me results on a glass brain. But I don't have any
cluster wise corrected P-maps on output.
Or did I miss something ?
Best regards,
Matthieu
2015-04-13 16:51 GMT+02:00 Douglas Greve :
> Does the BPM toolbo
clusterwise correction is a type of FWE correction. If the FWE you are
using is good enough for you and you want to visualize the results on a
surface, then use mri_vol2surf. If this was done on the SPM template
space, then run the SPM T1 template through recon-all to get the surfaces
On 0
Thank you Douglas !
Matthieu
2015-04-13 22:13 GMT+02:00 Douglas N Greve :
> clusterwise correction is a type of FWE correction. If the FWE you are
> using is good enough for you and you want to visualize the results on a
> surface, then use mri_vol2surf. If this was done on the SPM template
> sp