Re: [Freesurfer] DTI Group Analysis Study

2011-11-14 Thread Antonella Kis
Sent: Friday, November 11, 2011 4:45 PM Subject: Re: [Freesurfer] DTI Group Analysis Study 1. Currently trac-all uses only the MNI template, not CVS. So yes, all   steps apply. 2. See the tracula tutorial, section outputs from tracula, to see where   to find the MNI-space outputs. 3. What

[Freesurfer] DTI Group Analysis Study

2011-11-14 Thread Antonella Kis
@nmr.mgh.harvard.edu Sent: Friday, November 11, 2011 4:45 PM Subject: Re: [Freesurfer] DTI Group Analysis Study 1. Currently trac-all uses only the MNI template, not CVS. So yes, all   steps apply. 2. See the tracula tutorial, section outputs from tracula, to see where   to find the MNI-space outputs. 3. What

[Freesurfer] DTI Group Analysis Study

2011-11-11 Thread Antonella Kis
Hi, I am trying to do a DTI Group Analysis study using a MNI152 standard space for registration. 1). I wonder in case I want to use MNI 152 and not CVS space using TRACULA if I have to follow all the steps     starting Setting Up a Configuration File to run Tracula and then to  continue

Re: [Freesurfer] DTI Group Analysis Study

2011-11-11 Thread Anastasia Yendiki
1. Currently trac-all uses only the MNI template, not CVS. So yes, all steps apply. 2. See the tracula tutorial, section outputs from tracula, to see where to find the MNI-space outputs. 3. What clusters are you talking about? Do you want to do a voxel-based analysis? If so, why are