Re: [Freesurfer] Defining the Calcarine and distances from it in the Hinds et al. V1 label

Dear Bruce, Sorry for the delay in replying - busy summer. Using mris_divide parcellation actually worked really well once I figured out how to convert the Hinds V1 labels to Annotations (including creating a colour table), dividing the Annotations, and then converting them back to individual

Re: [Freesurfer] Defining the Calcarine and distances from it in the Hinds et al. V1 label

Glad it helped Bruce On Aug 8, 2011, at 6:18 AM, Krish Singh sing...@cardiff.ac.uk wrote: Dear Bruce, Sorry for the delay in replying - busy summer. Using mris_divide parcellation actually worked really well once I figured out how to convert the Hinds V1 labels to Annotations

[Freesurfer] Defining the Calcarine and distances from it in the Hinds et al. V1 label

Dear All, I've been trying out the automatic V1 labelling using the Hinds et al. (NeuroImage, 2008 vol. 39 (4) pp. 1585-99) and, as far as I can tell it seems to work pretty well on our anatomical scans (In general I'd be interested in the opinions/experiences of others who've tried it). I

Re: [Freesurfer] Defining the Calcarine and distances from it in the Hinds et al. V1 label

Hi Krish, 1. What do you mean just the calcarine itself? Do you mean the fundus? mris_divide_parcellation can be used to chop the pericalcarine or V1 labels up along it's primary eigenaxis, which is a reasonable approximation to eccentricity. 2. You could draw occipital pole in fsaverage