Re: [Freesurfer] Experience with -localGI on Mac

2008-04-24 Thread Nick Schmansky
Martin, The binary mris_fill for these OSs can be downloaded from here: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/fsdev/nicks/stable Nick On Thu, 2008-04-24 at 20:43 +0200, Martin Kavec wrote: > Hi Nick, > > I am just giving a try to the new mris_compute_lgi matlab script kindly > p

Re: [Freesurfer] Experience with -localGI on Mac

2008-04-24 Thread Martin Kavec
Hi Nick, I am just giving a try to the new mris_compute_lgi matlab script kindly provided by Marie, and so far so good. I would appreciate the new binary for: Mac OS X 10.5.2, linux_x86, and linux_x86_64. Thanks a lot. Martin On Thursday 24 April 2008 18:40:12 Nick Schmansky wrote: > Martin a

Re: [Freesurfer] Experience with -localGI on Mac

2008-04-24 Thread Nick Schmansky
Martin and other -localGI users, Independent of the matlab problem, there was a bug that was just discovered, affecting mris_fill, that breaks the -localGI usage. A fix will be provided (hopefully along with a fix for this matlab problem) in v4.0.4. If you need to use the -localGI feature, I can

Re: [Freesurfer] Experience with -localGI on Mac

2008-04-24 Thread Marie Schaer
Martin, Do you have a Mac intel or PowerPC? I am using Mac Intel, with Matlab 7.3 (release 2007a) and don't get this problem. Just to try, I relaunched the code with Matlab 7.4 (2007b), and got the same problem that you have, so that it should be related to a specificity of the Matlab 7.4

[Freesurfer] Experience with -localGI on Mac

2008-04-23 Thread Martin Kavec
Hello folks, I am trying -localGI on Mac, with working Matlab2007. 1. I think that the getmatlab script is not designed to work on Mac out of the box, since it is not by default in the $PATH, so it could be caught by "which". So I uncommented the three lines and set it hard. 2. That was easy,