[Freesurfer] Extract individual vertex thickness values from cortical parcellations

2018-10-06 Thread lindsay hanford
External Email - Use Caution Hello Freesurfer Community, I am looking for a way to extract thickness values at the level of each vertex from Freesurfer atlas-based parcellated regions (aparc.annot), or more generally lobes. Is this possible? Using mri_segstats I know it is possib

Re: [Freesurfer] Extract individual vertex thickness values from cortical parcellations

2018-10-09 Thread Greve, Douglas N.,Ph.D.
You can use matlab. read_curv.m will read in a thickness. read_annotation.m will read in the annotation. Look at the help in both for more info On 10/06/2018 11:36 AM, lindsay hanford wrote: > > External Email - Use Caution > > Hello Freesurfer Community, > > I am looking for a way to ex