Re: [Freesurfer] Fw: Re: bbregister

2017-02-15 Thread Douglas N Greve
You don't need to do the bbregister or tkregister steps if the FS results are based on the T1.nii image as input. You can just use mri_vol2vol with --regheader instead of --reg t1.reg.dat (but the results should be about the same). For the problem, does aparc+aseg show up properly on the

[Freesurfer] Fw: Re: bbregister

2017-02-14 Thread John Anderson
Thank you very much! Kindly, I have one follow up question:   I have VOI 20X20X20 mm have been created during an MR spectroscopy session. This VOI was placed in specific loacation on the T1 image. I have created this VOI using the command "mri_volsynth"  and I want to move it from native space