Re: [Freesurfer] Fwd: Tkregister2 error, moveable not present just white screen

2016-09-16 Thread A Nunes
> > Hi Doug and all, > I just resend this email in case it did not reach, any help will be appreciated. > > Thanks for your help. I was using the preprocessed thinking that after > motion correction it would be more accurate and --init-header because they > where acquired in the same session.

Re: [Freesurfer] Fwd: Tkregister2 error, moveable not present just white screen

2016-09-14 Thread A Nunes
Hi Dough, Thanks for your help. I was using the preprocessed thinking that after motion correction it would be more accurate and --init-header because they where acquired in the same session. I changed to a raw moveable and the results did not change for the following: With -init-fsl the moveable

Re: [Freesurfer] Fwd: Tkregister2 error, moveable not present just white screen

2016-09-12 Thread Douglas N Greve
I think the problem is the initialization. I noticed you used --init-header. This should only be used if the two volumes were acquired during the same session and the direction cosines (ie, geometry) info is accurate for both. Is this the case? I noticed that the input has "preproc" in the name

[Freesurfer] Fwd: Tkregister2 error, moveable not present just white screen

2016-09-12 Thread A Nunes
Hi Doug I can't see any errors in the log file, and with other datasets I did not have this issue. My register.dat is: 50664 3.00 4.50 0.15 9.996076822280884e-01 -2.117119915783405e-02 -1.833262108266354e-02 3.139470825195312e+02 1.872027479112148e-02 1.825972087681293e-02 9.996579289