Re: [Freesurfer] Fwd: tracula problem:poor forceps major tract

2012-12-20 Thread Anastasia Yendiki
Hi Bryon - I was able to reconstruct the forceps major in your subject after tweaking some of the 7 control points for the initialization. I'm attaching the text file with the corrected control points - just drop it in dlabel/diff and rerun the path reconstruction (don't use reinit, though!)

Re: [Freesurfer] Fwd: tracula problem:poor forceps major tract

2012-11-29 Thread Anastasia Yendiki
Hi Bryon - It does look like this individual and the tract atlas are not in good alignment. The one step that requires good alignment is for choosing an initial guess for the pathway. If the fmajor from all or most of the subjects that are included in the tract atlas goes through the