You will have to go through a few steps.
1. Sample your labels onto the surface with
mri_vol2surf --mov yoursegmentation.mgz --regheader --s subject --hemi lh
--interp nearest --o lh.mysegmentation.mgz
2. Convert the surface-sampled segmentation to an annotation using
mris_seg2annot. Run it with
External Email - Use Caution
Dear Freesurfer Experts,
I have a predetermined cortical parcels in native space. I want to display
them on brain surface, As shown in the last image of page bellow:
https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/OutputData_freeview
I have loa