[Freesurfer] LME Contrast Question

2019-12-04 Thread Hua, Jessica
External Email - Use Caution Hi FreeSurfer Experts, I had a question regarding contrasts for univariate LME models. I am interested in looking at the interaction of alcohol with change in volume across two time-points. Included in my model are covariates Gender, ICV, and Previ

Re: [Freesurfer] LME: contrast questions

2016-11-28 Thread jorge luis
Yes, it was arbitrary. A linear trajectory was a sufficiently good model for the mean response over time for most of the cortex points in my analyses. Also if you only have at most three time points per user then you can only have at most two random effects in your mixed-model (intercept and tim

Re: [Freesurfer] LME: contrast questions

2016-11-28 Thread jorge luis
Hi Jordi You have implicitlyincluded the reference group in your statistical model by includingan intercept term and a time variable: group0 intercept: ß1group0 time: ß2group1 intercept:ß1+ß3group1 time: ß2+ß4group2 intercept:ß1+ß5group2 time: ß2+ß6 >From here you canquickly see that your prop

[Freesurfer] LME contrast 3 groups

2016-08-19 Thread Sarah Hirsiger
Dear FreeSurfer experts, I would appreciate a confirmation regarding correctness of my approach. I am trying to run an LME model for three groups (group1=controls, group2 and group3) and two time points. I followed the tutorial on https://surfer.nmr.mgh.harvard.edu/fswiki/LinearMixedEffectsM

Re: [Freesurfer] LME - contrast

2013-02-13 Thread Alex Hanganu
viado:* Martes 12 de febrero de 2013 18:29 *Asunto:* [Freesurfer] LME - contrast Dear Jorge, For the statistical analysis of longitudinal data we used the "Two Stage Model" (TSM) and the "Linear Mixed Effects". Our intergroup LME results (2 groups

Re: [Freesurfer] LME - contrast

2013-02-12 Thread jorge luis
Best -Jorge > > De: Alex Hanganu >Para: FS Mailing List ; Jorge L. Bernal-Rusiel > >Enviado: Martes 12 de febrero de 2013 18:29 >Asunto: [Freesurfer] LME - contrast > > >Dear Jorge, > >For the statistical analysis of longitudinal

[Freesurfer] LME - contrast

2013-02-12 Thread Alex Hanganu
Dear Jorge, For the statistical analysis of longitudinal data we used the "Two Stage Model" (TSM) and the "Linear Mixed Effects". Our intergroup LME results (2 groups, 2 time points) had many similarities with TSM results. Then with TSM we analysed the intragroup changes (one group, and 2 ti