Re: [Freesurfer] LME model contrast matrix (Diers, Kersten /DZNE)

2019-11-07 Thread Diers, Kersten /DZNE
erence contrast', which has -1 and +1 at the appropriate columns, and zeros otherwise. Best regards, Kersten > Thanks! > > Best regards, > Guodong > > > > > > > ---------- > > > > Date: Tue, 5 Nov 2019 09:48:06 +000

Re: [Freesurfer] LME model contrast matrix (Diers, Kersten /DZNE)

2019-11-05 Thread Liu Guodong
00 > From: "Diers, Kersten /DZNE" > Subject: Re: [Freesurfer] LME model contrast matrix (Diers, Kersten > /DZNE) > To: "freesurfer@nmr.mgh.harvard.edu" > Message-ID: <1572947286.4016.34.ca...@dzne.de> > Content-Type: text/plain; charset="utf-8&qu

Re: [Freesurfer] LME model contrast matrix (Diers, Kersten /DZNE)

2019-11-05 Thread Diers, Kersten /DZNE
> > > >    External Email - Use Caution > > > > Dear experts: > > I am trying to run preproc-sess -s sess01 -fsd bold -stc up > > -surface fsaverage lhrh -mni305 -fwhm 5 -per-run > > But the outcome is ERROR: no run directories found. > > > &g

Re: [Freesurfer] LME model contrast matrix (Diers, Kersten /DZNE)

2019-11-03 Thread Liu Guodong
; > _______ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > -- next part -- &

Re: [Freesurfer] LME model contrast matrix

2019-10-24 Thread Diers, Kersten /DZNE
External Email - Use Caution Hi Guodong, On Di, 2019-10-22 at 16:05 +0800, Liu Guodong wrote: > External Email - Use Caution > > Hello FreeSurfer Developers, > > I'm doing the LME tutorial, and I have some questions . > > 1. Why don’t we need to put the healthy

[Freesurfer] LME model contrast matrix

2019-10-22 Thread Liu Guodong
External Email - Use Caution Hello FreeSurfer Developers, I'm doing the LME tutorial, and I have some questions . 1. Why don’t we need to put the healthy controls in the designed matrix X? 2. What’s the interpretation of the first row of the contrast matrix [1 0 0 0 0], does it