Re: [Freesurfer] Lesion Heatmap question - follow up

2021-03-25 Thread Douglas N. Greve
Do you want to do it on a voxel-wise (map) basis? I guess you could just run mri_concat subj1/lesionmap.mni152.mgz subj2/lesionmap.mni152.mgz ... subjN/lesionmap.mni152.mgz --o stack.lesionmaps.mgz Then run a voxel-wise GLM on the stack. This tricky. You'll probably want to smooth it some (mri_f

[Freesurfer] Lesion Heatmap question - follow up

2021-03-23 Thread XY XY
External Email - Use Caution Thanks Douglas, "mri_convert lesionmap.mgz -at samseg.m3z lesionmap.mni152.mgz" worked fabulously after some tweaks in the command line! What would be the best approach to compare population-wise lesion heat maps between groups of subjects using the