Re: [Freesurfer] Problem with longitudinal processing (MS lesions/samseg)

2022-06-24 Thread Douglas N. Greve
On 6/20/2022 3:03 AM, Wittayer, Matthias wrote: External Email - Use Caution Hi, thanks for your answer. Yes I did the longitudinal runs using the base as described in the manual. So the pipeline is: 1.) Cross sectional Recon all 2.) recon-all -base Template.nii -tp timepoint1.nii -

Re: [Freesurfer] Problem with longitudinal processing (MS lesions/samseg)

2022-08-26 Thread Wittayer, Matthias
] Problem with longitudinal processing (MS lesions/samseg) On 6/20/2022 3:03 AM, Wittayer, Matthias wrote: External Email - Use Caution Hi, thanks for your answer. Yes I did the longitudinal runs using the base as described in the manual. So the pipeline is: 1.) Cross sectional Recon all 2

Re: [Freesurfer] Problem with longitudinal processing (MS lesions/samseg)

2022-08-28 Thread Douglas N. Greve
, Stefano *Betreff:* Re: [Freesurfer] Problem with longitudinal processing (MS lesions/samseg) On 6/20/2022 3:03 AM, Wittayer, Matthias wrote: *External Email - Use Caution * Hi, thanks for your answer. Yes I did the longitudinal runs using the base as described in the