Re: [Freesurfer] Question about recon-all.v6.hires

2019-05-20 Thread Greve, Douglas N.,Ph.D.
They should be there. Can you send recon-all.log and conf2hires.log files? On 5/20/19 9:59 AM, Bruce Fischl wrote: > Hi Victor > > the lh.white.{KH} are generated from the lh.white file, so I don't > think it can have skipped creating it. Was it deleted? Can you double > check? > > Bruce > On

Re: [Freesurfer] Question about recon-all.v6.hires

2019-05-20 Thread Bruce Fischl
Hi Victor the lh.white.{KH} are generated from the lh.white file, so I don't think it can have skipped creating it. Was it deleted? Can you double check? Bruce On Mon, 20 May 2019, Zeng,Victor (BIDMC - Psychiatry) wrote: Hi all, I am running 7T scans through FS6, and I have been

[Freesurfer] Question about recon-all.v6.hires

2019-05-20 Thread Zeng,Victor (BIDMC - Psychiatry)
Hi all, I am running 7T scans through FS6, and I have been recommended to install the tools in ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/6.0.0-patch/hcp/ . So I ran the new recon-all.v6.hires, specifically with the command "recon-all.hires.v6 -s subj -conf2hires -all" For the