Re: [Freesurfer] Running FreeSurfer with fmriprep

2021-06-24 Thread Rosalia Dacosta Aguayo
External Email - Use Caution Hi Douglas, Could I share one T1 with you so you can closely inspect it and give me your opinion? Kind regards, Rosie El jue., 24 jun. 2021 18:22, Douglas N. Greve escribió: > It just looked noisy to me, but then again the images were pretty small

Re: [Freesurfer] Running FreeSurfer with fmriprep

2021-06-24 Thread Douglas N. Greve
It just looked noisy to me, but then again the images were pretty small On 6/24/2021 12:00 PM, Rosalia Dacosta Aguayo wrote: External Email - Use Caution Hi Douglas, Whay do you exactly mean by low quality data? As far as I have been told, is high. I would like to know so I cam discu

Re: [Freesurfer] Running FreeSurfer with fmriprep

2021-06-24 Thread Rosalia Dacosta Aguayo
External Email - Use Caution Hi Douglas, Whay do you exactly mean by low quality data? As far as I have been told, is high. I would like to know so I cam discuss it further with the engineers as we are at the very beggining of the acquisition. Kind regards, Rosie El jue., 24 ju

Re: [Freesurfer] Running FreeSurfer with fmriprep

2021-06-24 Thread Douglas N. Greve
It looks like the data are fairly low quality. This will require some manual intervention (control points, fixing topologogical errors, etc). See our wiki on manual interventions On 6/15/2021 10:52 AM, Rosalia Dacosta Aguayo wrote: External Email - Use Caution Here is what I am refer