[Freesurfer] TRACULA and CVS space

2012-03-29 Thread Antonella Kis
Hi, I would like to know if for a probabilistic tractrography using TRACULA I can use the CVS space as a common template to register the diffusion data instead of  MNI template. How I should change for the CVS space the following: set doregmni = 1 which is the default for the MNI space. If I

Re: [Freesurfer] TRACULA and CVS space

2012-03-29 Thread Priti Srinivasan
Hi Antonella, We've not released CVS template /Priors for tracula yet. You can only use MNI template for tracula now. We're still testing CVS. Thanks, Priti Hi, I would like to know if for a probabilistic tractrography using TRACULA I can use the CVS space as a common template to register

Re: [Freesurfer] TRACULA and CVS space

2012-03-29 Thread Anastasia Yendiki
Note that tracula doesn't extract from the atlas the exact spatial location of the tracts. It only extracts which anatomical labels are the neighbors of the tract at each point along its trajectory. So it's not as sensitive to misregistration as a voxel-based analysis would be. Our paper