Hi everyone,
It’s been two weeks that I’ve been facing some issues with Tracula. I hope you
could help me with that.
I run trac-all -prep -c on some DICOM files but I had the following error :
WARNING: file
/Users/ismailkoubiyr/Documents/PFE/Tracula/dti/SER_5/MR.1.2.826.0.1.3680043.6.8878.2255
Hi Efrat - You could just use cp instead of ln -s. This will duplicate the
file, instead of creating a link to it.
a.y
On Tue, 5 Apr 2016, Efrat Kliper wrote:
Dear Anastasia,
Thank you for the fast replay.
I have tried both suggestions, however it still reports: Operation not
suppor
Dear Anastasia,
Thank you for the fast replay.
I have tried both suggestions, however it still reports: Operation not
supported
Also, I have used the links that you have sent me but non work. This time
(after changing according to the links), I got the message: operation denied
I don’t know
Hi Efrat - This appears to be a virtual machine problem:
https://communities.vmware.com/thread/312591?tstart=0
There are some solutions suggested in that thread. I'm wondering if using
a relative instead of an absolute path for the symlink works, i.e.,
ln -sf dwi.nii.gz /mnt/hgfs/linux_share
Dear Freesurfer experts,
I upgraded to Freesurfer 5.3 from Freesurfer 5.1 (all of the preprocessing
has already been completed in Freesurfer 5.1) in order to run some new
functions of Tracula (I have also installed the latest Tracula update
(tracula.update.centos4_x86_64.5.3.2014_05_26).
I am u
Hi Cat - 1 out of 18 is the left CST. That one usually isn't hard to
initialize b/c it's not a part of the brain where it's especially
difficult to align a typical individual to the atlas. I'd wait to see the
final outcome before declaring defeat, but is there any chance that the
top of the br
Hello Experts
I am still at the first pre-proc step
for Tracula and although the script is running, it seems to have
difficulty initializing the first pathway (1 out of 18)
Please see below script excerpt:
Is that normal that it takes this many
trials to initiate a pathway?
Cheers,
Catherine
WA
