Subject: Re: [Freesurfer] Using only a aparc+aseg input file for TRACULA
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Jim,
You could run
set cmd = (mri_cc -aseg aseg.mgz -o aseg_CCseg.mgz $subj)
to get the CC lables.
Lilla
From:
freesurfer-boun...@nmr.mgh.harvard.edu<mailto:freesur
lf Of Yendiki, Anastasia
Sent: Thursday, October 21, 2021 6:56 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Using only a aparc+aseg input file for TRACULA
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This won't be good for the cc.* tracts for sure (in the new version we have the
entire CC cove
on behalf of Alexopoulos, Dimitrios
Sent: Thursday, October 21, 2021 2:59 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Using only a aparc+aseg input file for TRACULA
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Anastasia,
Upon closer inspection t
suggested below?
Jim
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Alexopoulos, Dimitrios
Sent: Thursday, October 21, 2021 5:08 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Using only a aparc+aseg input file for TRACULA
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External Email
__
From: freesurfer-boun...@nmr.mgh.harvard.edu
on behalf of Zollei, Lilla,Ph.D.
Sent: Thursday, October 21, 2021 3:39:29 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Using only a aparc+aseg input file for TRACULA
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Jim,
You could run
set cmd = (m
Subject: Re: [Freesurfer] Using only a aparc+aseg input file for TRACULA
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Anastasia,
Upon closer inspection the aparc+aseg we have are analogous to the FS labeling,
however, the CC is not segmented, it is simply labelled as
but not include the CC minor/major tracts?
Jim
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Yendiki, Anastasia
Sent: Wednesday, October 20, 2021 2:12 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Using only a aparc+aseg input file for TRACULA
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Thank you Anastasia.
Jim
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Yendiki, Anastasia
Sent: Wednesday, October 20, 2021 2:12 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Using only a aparc+aseg input file for TRACULA
a aparc+aseg input file for TRACULA
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Hi,
It was my understanding that TRACULA only uses the aparc+aseg segmentation from
the standard structural output from FS 7.1.1., and specifically for the
relative positions (left
External Email - Use Caution
Hi,
It was my understanding that TRACULA only uses the aparc+aseg segmentation from
the standard structural output from FS 7.1.1., and specifically for the
relative positions (left, right, anterior, etc.) of each tract with respect to
the segmentati
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