Hi Jeff
it looks pretty far off. Typically you want the surfaces to match the
general shape of the brain
cheers
Bruce
On Tue, 7 Feb 2012, Jeff Sadino wrote:
Thank you Martin and Nick for the clarification about how to verify the
talairach transformation in the newer FreeSurfers. I think I
Jeff,
to check the tal reg, use:
tkregister2 --s subjid --fstal --surfs
i've corrected the eTIV page to reflect this. --fstal loads mni305 as
the target. the target used in the tal reg step (711-2C...) is
registered with the mni305. note that --surfs is optional, as the
surfaces may not exis
Hi Jeff,
I am not sure about which atlas, but concerning the transforms:
4.2 and earlier: talairach_with_skull.lta
later versions: talairach.xfm
I am pretty convinced that the way to check as described here
http://surfer.nmr.mgh.harvard.edu/fswiki/eTIV
cd $SUBJECTS_DIR/subject/mri/transforms
tk
bump :)
any feedback on this would be very much appreciated. Thank you!
Jeff
On Mon, Jan 23, 2012 at 6:56 PM, Jeff Sadino wrote:
> Hello,
>
> Thank you Nick, Martin, and Doug for your previous feedback about ICV.
> I have a couple more questions that I am hoping you could clarify for
> me.
>
Hello,
Thank you Nick, Martin, and Doug for your previous feedback about ICV.
I have a couple more questions that I am hoping you could clarify for
me.
To verify my ICV value, some pages on the mailing list and wiki say to
use this command:
tkregister2 --s subject --fstal --surf
Other places sa
