Hello,
I am interested in a way to visualize the differences in the volume in
subcortical structures, preferably in 3D. For example, I would like to view
the Thalamus of controls. And then I would like to overlay a color-coded
map that shows the difference between the volume of the Control Thala
Hello,
I found a couple of scripts that might work, namely the mri_hausdorff_dist,
mri_distance_transform, the mri_compute commands, and the mri_seg_diff.
They all seem to do one part of what I want, but none all together. Has
anyone done this before and could they point me in the right directio
Hi Jeff,
mri_extract_label -t transforms/talairach.m3z...
will do most of what you want (it will also jacobian correct the label so
that you get a "mass" image). We never put this together into a pipeline
because it is of course well-known that interpreting the results from a
neurobiological p
