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Hi Bruce,
Thanks for the reply. What are the commands should I try?
mri_segment brainmask.mgz wm.mgz -wlo 90
and after:
recon-all -autorecon2-wm -autorecon3 -subjid
???
The images are scanned in a GE PETMR 3T. MR hardware configurati
Hi Bruno
it looks to me like there is very little gray/white contrast, which is
the root of your problem. YOu could try limiting the intensity ranges in
the segmentation and surface deformation steps using expert options (e.g.
-wlo for mri_segment). We can also help improve the acquisition. If
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Hello,
You can follow
https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/TroubleshootingDataV6.0 to
correct your defects.
Thanks and Regards
Nayan Wadhwani
On Thu, Feb 20, 2020 at 8:04 PM Bruno Pastorello <
bruno.pastore...@hc.fm.usp.br> wrote:
>
