[Freesurfer] Whole brain gray matter image

2011-02-07 Thread caoaize
Hello FS Experts, I am trying to generate the whole brain gray matter image, I use aparc_aseg.mgz - wm.mgz for gray matter mask, then use this mask for gray matter. Is it correct? What is the difference between aseg.mgz and ribbon.mgz? Hope your help. Thanks. Aize

Re: [Freesurfer] Whole brain gray matter image

2011-02-09 Thread Douglas N Greve
Do you want cortical and subcortical or just cortical? doug caoaize wrote: > Hello FS Experts, > > I am trying to generate the whole brain gray matter image, I use > aparc_aseg.mgz - wm.mgz for gray matter mask, then use this mask for > gray matter. Is it correct? What is the difference between

Re: [Freesurfer] Whole brain gray matter image

2011-03-09 Thread Douglas N Greve
t ? Thanks. > > Aize > > > > > Date: Tue, 1 Mar 2011 16:31:52 -0500 > > From: gr...@nmr.mgh.harvard.edu > > To: caoa...@hotmail.com > > Subject: Re: [Freesurfer] Whole brain gray matter image > > > > You'll probably have to go to 255 or so (255 is