: Douglas Merkitch
Date:06/05/2014 9:51 PM (GMT+01:00)
To: Freesurfer support list
Subject: Re: [Freesurfer] brain.finalsurfs.manedit.mgz file edits &
longitudinal processing
Hello Martin and FreeSurfer experts,
I've checked the recon-all.log from the 2nd tp of one of the longitudinal
Medical Center
Phone: (312) 563-3853
Fax: (312) 563-4660
Email: douglas_merki...@rush.edu<mailto:douglas_merki...@rush.edu>
Begin forwarded message:
From: Martin Reuter
mailto:mreu...@nmr.mgh.harvard.edu>>
Subject: Re: [Freesurfer] brain.finalsurfs.manedit.mgz file edits &
long
ilto:douglas_merki...@rush.edu>
Begin forwarded message:
*From: *Martin Reuter <mailto:mreu...@nmr.mgh.harvard.edu>>
*Subject: **Re: [Freesurfer] brain.finalsurfs.manedit.mgz file
edits & longitudinal processing*
*Date: *May 2, 2014 4:20:17 PM CDT
*To: *Freesurfer support list <
harvard.edu>>
Subject: Re: [Freesurfer] brain.finalsurfs.manedit.mgz file edits &
longitudinal processing
Date: May 2, 2014 4:20:17 PM CDT
To: Freesurfer support list
mailto:freesurfer@nmr.mgh.harvard.edu>>
Reply-To: Freesurfer support list
mailto:freesurfer@nmr.mgh.harvard.edu>>
Hi Doug,
so you
1. edited the cross sectionals and surfaces look fine (make sure you
edit the brain.finalsurfs.manedit.mgz file, which you create as a copy
of the brain.finalsurfs.mgz)
2. checked/edited the base and surfaces look fine too
3. ran the longitudinal from scratch (w/o any edits)
a
Dear Freesurfer experts,
I have a question regarding longitudinal edits. Specifically the
brain.finalsurfs.manedit.mgz file and the longitudinal processing stream in
Freesufer 5.1 on a Mac (freesurfer-i686-apple-darwin9.8.0-stable5-20110525).
The problem that I am having is that the edits saved
