There are several threads about this in the archives. You need to look at
the eigenectors in dmri/dtifit_V1.nii.gz and check that they are oriented
in a way that makes sense with the anatomy.
On Sat, 22 Dec 2012, s0675204 wrote:
Hi
No I did not. Actually, I'm not sure how to do that. Is
This doesn't look right. Are you certain that your gradient table is
correct? Have you looked at the eigenvectors of the tensor fit to make
sure they're in the right orientation?
On Fri, 21 Dec 2012, s0675204 wrote:
Thank you so much for your help! Sorry if I asked something that has
Hi Prerona - As I've mentioned to others, you can ignore the Degenerate
spline segment message.
I can't tell what you mean by only traced a part of the trac. Can you
see the rest of it when you play with the threshold? Are you
reconstructing only the ILF? If not, do the other pathways look
Hello
I have been running trac-paths, and thought it finishes with a message
saying no errors,
I get an error saying ERROR: Degenerate spline segment in the
intermediate message logs
Also I looked at the result using this command:
freeview -v
Hello,
thank you for your help with the first steps of running Tracula.
I was trying to run trac-all step 3 (paths), but was getting an error
with the mergedph1samples file. I saw on the mailbase that you have
suggested to run bedpost directly to fix this
I have 3 questions about this:
1) do
1) Can't hurt to delete.
2) Yes.
3) Yes.
On Wed, 12 Dec 2012, s0675204 wrote:
Hello,
thank you for your help with the first steps of running Tracula.
I was trying to run trac-all step 3 (paths), but was getting an error
with the mergedph1samples file. I saw on the mailbase that you have
