Re: [Freesurfer] cortical thickness of a ROI

2011-01-02 Thread Douglas Greve
Try removing the --reshape from both steps 3 and 4. doug On 12/29/10 5:35 AM, angela.fav...@unipd.it wrote: cortical thickness of a volume-defined ROI Dear all, I have not received any advice about this point. Can somebody help me? thank you! I followed the instructions found in Freesurfer

[Freesurfer] cortical thickness of a ROI

2010-12-29 Thread angela . favaro
Dear all, I have not received any advice about this point. Can somebody help me? thank you! I followed the instructions found in Freesurfer tutorials ('cortical thickness of a volume-defined ROI'). However, in the point 4 of the procedure I am not able to change the --reshape default. My run is:

Re: [Freesurfer] cortical thickness of a ROI

2010-12-29 Thread Bruce Fischl
Hi Angela Doug as been away and this is really his domain. If you haven't gotten an answer in a week so please repost one more time Bruce On Dec 29, 2010, at 5:35 AM, angela.fav...@unipd.it wrote: Dear all, I have not received any advice about this point. Can somebody help me? thank you!