Re: [Freesurfer] error with fcseed-config & fcseed-sess

Those labels should exist in your individual subject's label folder. There should be a V1 label in there too. You can use mri_label2vol to create a binary volume in the anatomical space (this will be a volume where voxels values are either 1 (in V1) or 0 (out of V1)). This volume will be 256^3,

Re: [Freesurfer] error with fcseed-config & fcseed-sess

Hi Dr. Greeve, Would the following commands be enough to map my regions of interest from the fsaverage map to my individual subjects?: https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/AnatomicalROI Namely, the following bits of code: cd $SUBJECTS_DIR mri_label2label \ --srcsubject fsavera

Re: [Freesurfer] error with fcseed-config & fcseed-sess

Hi Dr. Greeve, Oh I see, thank you for the fix for V1. To probe further, I'm curious why the visual areas weren't implemented? Is there an additional step I could take to access other regions in the visual hierarchy such as V2, V3, and V5? Thanks for your insight Dr. Greeve, Jess On Jul 26, 2017

Re: [Freesurfer] error with fcseed-config & fcseed-sess

By default, you are using aparc+aseg.mgz as the ROI atlas, so use 1021 or 2021 for V1. 1021ctx-lh-pericalcarine120 100 60 0 On 07/26/2017 12:37 PM, Jessica Huang wrote: > > Hi freesurfer experts, > > > I’m using the fcseed-config and fcseed-sess commands to create a seed >

[Freesurfer] error with fcseed-config & fcseed-sess

Hi freesurfer experts, I’m using the fcseed-config and fcseed-sess commands to create a seed at V1 in accordance with the FsFastFunctionalConnectivity Walkthrough Steps: *STEP 4: Use fcseed-config to configure the