Re: [Freesurfer] mri_glmfit error with aparc table flag

2017-04-20 Thread Douglas N Greve
> > > post in the > > > > >> forum that used "--surf fsaverage lh "‎ > and it > > worked. > > > > >> Best, > > > > >> Paul > >

Re: [Freesurfer] mri_glmfit error with aparc table flag

2017-04-20 Thread miracle ozzoude
lt;mailto:miracoo...@gmail.com> > > <mailto:miracoo...@gmail.com <mailto:miracoo...@gmail.com>>>> wrote: > > > > >> Thanks doug. Does it mean when using the --table > > > flag, you > > > > can't &

Re: [Freesurfer] mri_glmfit error with aparc table flag

2017-04-20 Thread Douglas N Greve
me across several > > post in the > > > >> forum that used "--surf fsaverage lh "‎ and it > worked. > > > >> Best, > > > >> Paul > > > >> > > > >>

Re: [Freesurfer] mri_glmfit error with aparc table flag

2017-04-20 Thread miracle ozzoude
e fsaverage template? I came across several > > post in the > > > >> forum that used "--surf fsaverage lh "‎ and it worked. > > > >> Best, > > > >> Paul > >

Re: [Freesurfer] mri_glmfit error with aparc table flag

2017-04-19 Thread Douglas N Greve
Best, > > >> Paul > > >> > > >> Sent from my BlackBerry 10 smartphone. > > >> *From: *Douglas Greve > > >> *Sent: *Tuesday, April 18, 2017 9:52 PM > > >> *To: *free

Re: [Freesurfer] mri_glmfit error with aparc table flag

2017-04-19 Thread miracle ozzoude
ked. > > >> Best, > > >> Paul > > >> > > >> Sent from my BlackBerry 10 smartphone. > > >> *From: *Douglas Greve > > >> *Sent: *Tuesday, April 18, 2017 9:52 PM > > >> *To: *frees

Re: [Freesurfer] mri_glmfit error with aparc table flag

2017-04-19 Thread Douglas N Greve
as Greve > >> *Sent: *Tuesday, April 18, 2017 9:52 PM > >> *To: *freesurfer@nmr.mgh.harvard.edu > <mailto:freesurfer@nmr.mgh.harvard.edu> > >> <mailto:freesurfer@nmr.mgh.harvard.edu > <mailto:freesurfer@nmr.mgh.harvard.edu>&g

Re: [Freesurfer] mri_glmfit error with aparc table flag

2017-04-19 Thread miracle ozzoude
y BlackBerry 10 smartphone. > >> *From: *Douglas Greve > >> *Sent: *Tuesday, April 18, 2017 9:52 PM > >> *To: *freesurfer@nmr.mgh.harvard.edu > >> <mailto:freesurfer@nmr.mgh.harvard.edu> > >> *Reply To: *Freesurfer support list > >&

Re: [Freesurfer] mri_glmfit error with aparc table flag

2017-04-19 Thread Douglas N Greve
t used "--surf fsaverage lh "‎ and it worked. >> Best, >> Paul >> >> Sent from my BlackBerry 10 smartphone. >> *From: *Douglas Greve >> *Sent: *Tuesday, April 18, 2017 9:52 PM >> *To: *freesurfer@nmr.mgh.harvard.edu >

Re: [Freesurfer] mri_glmfit error with aparc table flag

2017-04-19 Thread miracle ozzoude
erry 10 smartphone. > *From: *Douglas Greve > *Sent: *Tuesday, April 18, 2017 9:52 PM > *To: *freesurfer@nmr.mgh.harvard.edu > *Reply To: *Freesurfer support list > *Subject: *Re: [Freesurfer] mri_glmfit error with aparc table flag > > Don't include --surf fsaverage lh. It t

Re: [Freesurfer] mri_glmfit error with aparc table flag

2017-04-18 Thread miracle ozzoude
lh "‎ and it worked. > Best, > Paul > > Sent from my BlackBerry 10 smartphone. > *From: *Douglas Greve > *Sent: *Tuesday, April 18, 2017 9:52 PM > *To: *freesurfer@nmr.mgh.harvard.edu > *Reply To: *Freesurfer support list > *Subject: *Re: [Freesurfer] mri_glmfit erro

Re: [Freesurfer] mri_glmfit error with aparc table flag

2017-04-18 Thread Douglas Greve
Re: [Freesurfer] mri_glmfit error with aparc table flag Don't include --surf fsaverage lh. It thinks the input is a surface, not a table On 4/18/17 9:21 PM, miracle ozzoude wrote: Hello freesurfer, I am trying to run mri_glmfit with the --table flag. My aparc_lh_thick_stats.txt co

Re: [Freesurfer] mri_glmfit error with aparc table flag

2017-04-18 Thread miracooloz
esday, April 18, 2017 9:52 PMTo: freesurfer@nmr.mgh.harvard.eduReply To: Freesurfer support listSubject: Re: [Freesurfer] mri_glmfit error with aparc table flag Don't include --surf fsaverage lh. It thinks the input is a surface, not a table On 4/18

Re: [Freesurfer] mri_glmfit error with aparc table flag

2017-04-18 Thread Douglas Greve
Don't include --surf fsaverage lh. It thinks the input is a surface, not a table On 4/18/17 9:21 PM, miracle ozzoude wrote: Hello freesurfer, I am trying to run mri_glmfit with the --table flag. My aparc_lh_thick_stats.txt contain entorhinal and parahippocampal thickness values for 32 subje

[Freesurfer] mri_glmfit error with aparc table flag

2017-04-18 Thread miracle ozzoude
Hello freesurfer, I am trying to run mri_glmfit with the --table flag. My aparc_lh_thick_stats.txt contain entorhinal and parahippocampal thickness values for 32 subjects. I ran the glm command and received an error. Please, how can i solve this issue? I have included my command, fsgd file, contras