Re: [Freesurfer] mri_vol2surf nii.gz to .mgh conversion

2015-07-03 Thread Milde, Christopher
...@nmr.mgh.harvard.edu [mailto:freesurfer-boun...@nmr.mgh.harvard.edu] Im Auftrag von Douglas N Greve Gesendet: Donnerstag, 2. Juli 2015 17:18 An: freesurfer@nmr.mgh.harvard.edu Betreff: Re: [Freesurfer] mri_vol2surf nii.gz to .mgh conversion Sorry, can you backup and tell me what you are trying to accomplish? doug

[Freesurfer] mri_vol2surf nii.gz to .mgh conversion

2015-07-02 Thread Milde, Christopher
Dear Freesurfers, I have problems converting .nii.gz files into .mgh files needed e.g. for performing ROI analysis. I used mri_vol2surf and mri_vol2vol to produce .mgh files either to visualize contrast estimates and significance maps on volumes or surfaces I think the problem is due to voxel

Re: [Freesurfer] mri_vol2surf nii.gz to .mgh conversion

2015-07-02 Thread Douglas N Greve
How did you create the EX.sm5.lh analysis? It is probably the case that it is already on the surface in which case you don't need to run vol2surf. doug On 07/02/2015 04:54 AM, Milde, Christopher wrote: Dear Freesurfers, I have problems converting .nii.gz files into .mgh files needed e.g.

Re: [Freesurfer] mri_vol2surf nii.gz to .mgh conversion

2015-07-02 Thread Milde, Christopher
An: freesurfer@nmr.mgh.harvard.edu Betreff: Re: [Freesurfer] mri_vol2surf nii.gz to .mgh conversion How did you create the EX.sm5.lh analysis? It is probably the case that it is already on the surface in which case you don't need to run vol2surf. doug On 07/02/2015 04:54 AM, Milde, Christopher wrote: Dear

Re: [Freesurfer] mri_vol2surf nii.gz to .mgh conversion

2015-07-02 Thread Douglas N Greve
...@nmr.mgh.harvard.edu [mailto:freesurfer-boun...@nmr.mgh.harvard.edu] Im Auftrag von Douglas N Greve Gesendet: Donnerstag, 2. Juli 2015 14:49 An: freesurfer@nmr.mgh.harvard.edu Betreff: Re: [Freesurfer] mri_vol2surf nii.gz to .mgh conversion How did you create the EX.sm5.lh analysis? It is probably