The surface coordinates are in "tkregister" coordinates whereas freeview
is giving you scanner coordinates.
See https://surfer.nmr.mgh.harvard.edu/fswiki/CoordinateSystems for how
to convert between them
On 3/25/2021 7:14 AM, Shizuka Hayashi wrote:
External Email - Use Caution
Dear
External Email - Use Caution
Dear Freesurfer team,
I have a question about the inconsistency between the vertex read from
read_surf and vertex shown in Freeview.
I have a volume from the hippocampal subfield pipeline and I converted it to
surface mesh using
mri_tessellate
