Re: [Freesurfer] recon-all CUDA error

2014-07-08 Thread Jordi Delgado
? - Bryan -- *From:* Jordi Delgado [jordi...@pic.es] *Sent:* Thursday, July 03, 2014 12:36 AM *To:* Chiu, Bryan (PHTH) *Cc:* freesurfer@nmr.mgh.harvard.edu *Subject:* Re: [Freesurfer] recon-all CUDA error Hi again, Sorry I think that we have

Re: [Freesurfer] recon-all CUDA error

2014-07-08 Thread Chiu, Bryan (PHTH)
(PHTH) Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] recon-all CUDA error Hi again experts, What version of CUDA was used to compile the *_cuda files, on the FS 5.3 stable version? Was it CUDA 5.0 or higher? /Jordi 2014-07-03 18:25 GMT+02:00 Chiu, Bryan (PHTH) bryan.c

Re: [Freesurfer] recon-all CUDA error

2014-07-03 Thread Jordi Delgado
: Chiu, Bryan (PHTH) bryan.c...@ubc.ca Subject: Re: [Freesurfer] recon-all CUDA error (Chiu, Bryan (PHTH)) To: freesurfer@nmr.mgh.harvard.edu freesurfer@nmr.mgh.harvard.edu Message-ID: 680d9b8d5feaaf40a1a5878265424ca44a594...@s-itsv-mbx06p.ead.ubc.ca Content-Type: text/plain; charset

Re: [Freesurfer] recon-all CUDA error

2014-07-03 Thread Chiu, Bryan (PHTH)
2014 16:34:45 + From: Chiu, Bryan (PHTH) bryan.c...@ubc.camailto:bryan.c...@ubc.ca Subject: Re: [Freesurfer] recon-all CUDA error (Chiu, Bryan (PHTH)) To: freesurfer@nmr.mgh.harvard.edumailto:freesurfer@nmr.mgh.harvard.edu freesurfer@nmr.mgh.harvard.edumailto:freesurfer@nmr.mgh.harvard.edu Message

Re: [Freesurfer] recon-all CUDA error

2014-07-02 Thread Chiu, Bryan (PHTH)
(PHTH) bryan.c...@ubc.ca Subject: Re: [Freesurfer] recon-all CUDA error (Chiu, Bryan (PHTH)) To: freesurfer@nmr.mgh.harvard.edu freesurfer@nmr.mgh.harvard.edu Message-ID: 680d9b8d5feaaf40a1a5878265424ca44a594...@s-itsv-mbx06p.ead.ubc.ca Content-Type: text/plain; charset=iso-8859-1 Hi all, I

Re: [Freesurfer] recon-all CUDA error

2014-07-02 Thread Jordi Delgado
of the recon-all using all of these in combination. - Bryan Date: Mon, 30 Jun 2014 16:34:45 + From: Chiu, Bryan (PHTH) bryan.c...@ubc.ca Subject: Re: [Freesurfer] recon-all CUDA error (Chiu, Bryan (PHTH)) To: freesurfer@nmr.mgh.harvard.edu freesurfer@nmr.mgh.harvard.edu Message-ID

Re: [Freesurfer] recon-all CUDA error

2014-07-02 Thread Chiu, Bryan (PHTH)
of CUDA that isn't installed, or trying the CUDA samples. I really want to get this to work. -Bryan Date: Fri, 27 Jun 2014 17:59:37 + From: Chiu, Bryan (PHTH) bryan.c...@ubc.camailto:bryan.c...@ubc.ca Subject: [Freesurfer] recon-all CUDA error To: freesurfer@nmr.mgh.harvard.edumailto:freesurfer

Re: [Freesurfer] recon-all CUDA error (Chiu, Bryan (PHTH))

2014-06-30 Thread Chiu, Bryan (PHTH)
this to work. -Bryan Date: Fri, 27 Jun 2014 17:59:37 + From: Chiu, Bryan (PHTH) bryan.c...@ubc.ca Subject: [Freesurfer] recon-all CUDA error To: freesurfer@nmr.mgh.harvard.edu freesurfer@nmr.mgh.harvard.edu Message-ID: 680d9b8d5feaaf40a1a5878265424ca44a594...@s-itsv-mbx06p.ead.ubc.ca

[Freesurfer] recon-all CUDA error

2014-06-27 Thread Chiu, Bryan (PHTH)
Hi, I'm fairly novice at Linux and I've been trying to setup CUDA for recon-all. I get an error as follows: [TLA@COGMOB-linuxPC ~]$ recon-all -s bert -use-gpu -openmp 8 Testing for CUDA device: /usr/freesurfer/bin/mri_em_register_cuda: error while loading shared libraries: libcudart.so.5.0: