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Dear Douglas N. GreveAs you commented, the command, you suggested,
transformed well from the aparc+aseg.mgz with native space to MNI 152 space.
I also tried the command to transform fiber bundles (the
merged_avg33_mni_bbr.mgz), extracted from TRACULA, t
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you mean you want to map the aparc+aseg.mgz from the subject space to
the cvs/mni152 space using the cvs transform? Try this
mri_convert aparc+aseg.mgz -at cvs.m3z aparc+aseg.from-subject-to-cvs.mgz
where cvs.m3z is the cvs nonlinear registratiopn
On
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I registered a subject to mni space using the mri_cvs_register command with
the --mni flag. However, the output files do not include a new
aparc.a2009s+aseg.mgz. I wanted this atlas overlayed on the mni registered
subject so I could extract one of the l
