[Freesurfer] reprocessing on FS4.0 takes much longer for some scans

2007-11-11 Thread Nicolas Cherbuin
Hi, At the beginning of the year I processed 400 scans on a linux cluster. It had a reported ram limit of 1 Gig but it could cope with the slight excess of FS3 and a processing time limit of 48 hours (which was fine for 99% of the scans). Most scans went through autorecon-all without problem.

Re: [Freesurfer] reprocessing on FS4.0 takes much longer for some scans

2007-11-11 Thread Bruce Fischl
Hi Nicolas, 1. No, sorry, the amount of RAM is sometimes dependent on the individual anatomy, and in any case can't be predefine. 2. Not sure about the itaniums. We have no real experience. 72 hours does sound pretty long. That's I think about what it used to take on our old athlons. Can you

Re: [Freesurfer] reprocessing on FS4.0 takes much longer for some scans

2007-11-12 Thread Pedro Paulo Oliveira Jr
ulo Oliveira Jr. -- mens. original -- Assunto:Re: [Freesurfer] reprocessing on FS4.0 takes much longer for some scans De: Bruce Fischl <[EMAIL PROTECTED]> Data: 11/11/2007 21:42 Hi Nicolas, 1. No, sorry, the amount of RAM is sometimes dependent on the individual an

RE: [Freesurfer] reprocessing on FS4.0 takes much longer for some scans

2007-11-12 Thread Pedro Paulo Oliveira Jr
PROTECTED] On Behalf Of Pedro Paulo Oliveira Jr Sent: segunda-feira, 12 de novembro de 2007 06:23 To: Bruce Fischl Cc: freesurfer@nmr.mgh.harvard.edu; Nicolas Cherbuin Subject: Re: [Freesurfer] reprocessing on FS4.0 takes much longer for some scans I'm sure Bruce has much more experience o

RE: [Freesurfer] reprocessing on FS4.0 takes much longer for some scans

2007-11-12 Thread Nicolas Cherbuin
on FS4.0 takes much longer for some scans Hi Nicolas, 1. No, sorry, the amount of RAM is sometimes dependent on the individual anatomy, and in any case can't be predefine. 2. Not sure about the itaniums. We have no real experience. 72 hours does sound pretty long. That's I think abo

RE: [Freesurfer] reprocessing on FS4.0 takes much longer for some scans

2007-11-12 Thread Bruce Fischl
econ2? Thanks Nic -Original Message- From: Bruce Fischl [mailto:[EMAIL PROTECTED] Sent: Sun 11/11/2007 4:30 PM To: Nicolas Cherbuin Cc: freesurfer@nmr.mgh.harvard.edu Subject:Re: [Freesurfer] reprocessing on FS4.0 takes much longer for some scans Hi Nicolas, 1. No,

Re: [Freesurfer] reprocessing on FS4.0 takes much longer for some scans

2007-11-12 Thread Doug Greve
EMAIL PROTECTED] Sent:Sun 11/11/2007 4:30 PM To:Nicolas Cherbuin Cc:freesurfer@nmr.mgh.harvard.edu Subject:Re: [Freesurfer] reprocessing on FS4.0 takes much longer for some scans Hi Nicolas, 1. No, sorry, the amount of RAM is sometimes dependent on the individual anatomy, and i