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Samseg-Run-Time-Hours 0.40
Thank you,
Sneha
From: Douglas N. Greve<mailto:dgr...@mgh.harvard.edu>
Sent: Monday, June 8, 2020 10:08 AM
To: freesurfer@nmr.mgh.harvard.edu<mailto:freesurfer@nmr.mgh.harvard.edu>
Subject: [EXTERNAL] Re: [Freesurfer] samseg with subfields {Disarmed}
<mailto:freesurfer@nmr.mgh.harvard.edu>
*Subject: *[EXTERNAL] Re: [Freesurfer] samseg with subfields
{Disarmed}
On 6/5/2020 4:47 PM, Sneha Pandya wrote:
*External Email - Use Caution *
Thank you Doug.
it is not run by default
* When I ran “s
surfer@nmr.mgh.harvard.edu<mailto:freesurfer@nmr.mgh.harvard.edu>
Subject: [EXTERNAL] Re: [Freesurfer] samseg with subfields {Disarmed}
Oh, sorry, that way of running recon-all will run samseg2recon. Sorry, I lost
track of what you are asking
On 6/8/2020 10:45 AM, Sneha Pandya wrote:
Ex
Thank you,
Sneha
*From: *Douglas N. Greve <mailto:dgr...@mgh.harvard.edu>
*Sent: *Monday, June 8, 2020 10:08 AM
*To: *freesurfer@nmr.mgh.harvard.edu
<mailto:freesurfer@nmr.mgh.harvard.edu>
*Subject: *[EXTERNAL] Re: [Freesurfer] samseg with subfields {Disarmed}
On 6/5/2020 4:47 PM,
rd.edu<mailto:freesurfer@nmr.mgh.harvard.edu>
Subject: [EXTERNAL] Re: [Freesurfer] samseg with subfields {Disarmed}
On 6/5/2020 4:47 PM, Sneha Pandya wrote:
External Email - Use Caution
Thank you Doug.
it is not run by default
* When I ran “samseg2recon –s subject” after running samseg
t the T1.mgz. file format is unimportant
*
Thank you,
Sneha
*From: *Douglas N. Greve <mailto:dgr...@mgh.harvard.edu>
*Sent: *Friday, June 5, 2020 4:05 PM
*To: *freesurfer@nmr.mgh.harvard.edu
<mailto:freesurfer@nmr.mgh.harvard.edu>
*Subject: *[EXTERNAL] Re: [Freesurfer] samseg w
m: Douglas N. Greve<mailto:dgr...@mgh.harvard.edu>
Sent: Friday, June 5, 2020 4:05 PM
To: freesurfer@nmr.mgh.harvard.edu<mailto:freesurfer@nmr.mgh.harvard.edu>
Subject: [EXTERNAL] Re: [Freesurfer] samseg with subfields {Disarmed}
On 6/5/2020 3:54 PM, Sneha Pandya wrote:
Ex
On 6/5/2020 3:54 PM, Sneha Pandya wrote:
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Dear Dough,
Is samseg2recon run by default when we run just samseg command? After
samseg is completed it displays towards the end samseg2recon run time
in sec and hours, right before computation time of samseg as
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Dear Dough,
Is samseg2recon run by default when we run just samseg command? After samseg is
completed it displays towards the end samseg2recon run time in sec and hours,
right before computation time of samseg as below. If it is called by samseg
com
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Dear Dough,
No worries, this was helpful too. Probably, I will test it on a subset of
subjects and compare the two for possible discrepancies.
Thank you,
Sneha
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Douglas N. Greve
Sent: Tuesda
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Dear Eugenio,
Thank you for quick response. That will be great if we could achieve it with
whole-head segmentation too, considering its shorter run time, but can
understand that it could be less reliable. If implemented, is it something that
will be
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