[Freesurfer] smoothed data stats

2010-08-09 Thread raka maitra
Dear all I would like to look at the change in the average values of thickness after smoothing. But mris_anatomical_stats does not work on the smoothed files as the no of vertices of the annot files and the smoothed files are very different. I tried recreating annot files using the flag -surf p

Re: [Freesurfer] smoothed data stats

2010-08-09 Thread Douglas N Greve
It should work. How are you smoothing the thickness file? You need to smooth it in the native surface space. doug raka maitra wrote: > Dear all > > I would like to look at the change in the average values of thickness > after smoothing. > But mris_anatomical_stats does not work on the smoothed

Re: [Freesurfer] smoothed data stats

2010-08-09 Thread raka maitra
Dear Doug Thanks for the clarification. I was using files in the standard fsaverage surface space. Thanks again! Raka From: Douglas N Greve To: raka maitra Cc: freesurfer_mailing_list Sent: Mon, August 9, 2010 4:02:11 PM Subject: Re: [Freesurfer] smoothed