Dear Doug
Thanks for the clarification. I was using files in the standard fsaverage surface space. Thanks again! Raka ________________________________ From: Douglas N Greve <gr...@nmr.mgh.harvard.edu> To: raka maitra <rakamai...@yahoo.com> Cc: freesurfer_mailing_list <freesurfer@nmr.mgh.harvard.edu> Sent: Mon, August 9, 2010 4:02:11 PM Subject: Re: [Freesurfer] smoothed data stats It should work. How are you smoothing the thickness file? You need to smooth it in the native surface space. doug raka maitra wrote: > Dear all > > I would like to look at the change in the average values of thickness > after smoothing. > But mris_anatomical_stats does not work on the smoothed files as the > no of vertices of the annot files and the smoothed files are very > different. > > I tried recreating annot files using the flag -surf pial and the > aparc+aseg.mgz but I got following error message: > could not open translation file > /Applications/freesurfer/cma_parcellation_colors.txt > could not open translation file > /Applications/freesurfer/Simple_surface_labels2002.txt > > Your help would be appreciated. > Thanks in advance > Raka > > ------------------------------------------------------------------------ > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
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