Hi Michael,
sorry, a bunch of us have been away in Barcelona with very slow network
access. Did this question get answered? I think Doug has something to do
this (as do I somewhere, but I'm sure Duog's is better :>)
cheers
Bruce
On Mon, 7 Jun
2010, Michael Scheel wrote:
> Dear FS experts,
>
Dear FS experts,
I have a anatomical scan of a subject with a rare neurogenetical disorder. I'd
like to compare this with a age matched control group.
How can I visualize a z-score transform map of the cortical thickness, i.e. how
would I compute and vizualize
the number/amount of standard devi
ok. That's good enough for me by now. Thanks a lot
Inês
2007/9/20, Bruce Fischl <[EMAIL PROTECTED]>:
>
> if you draw a label outlining the region you can use
> mris_anatomical_stats -l to get the thickness standard
> deviations I think. Usually they aren't that interesting because the
> thicknes
if you draw a label outlining the region you can use
mris_anatomical_stats -l to get the thickness standard
deviations I think. Usually they aren't that interesting because the
thickness varies with geometry (e.g. sulci are thinner than gyri).
cheers,
Bruce
On Thu, 20 Sep 2007, Inês Souta w
Well, I'm dealing with a patient with an heterogeneous lesion. Somehow, the
lesion area seems to have misled the algorithm in terms of white and pial
surface definition, leading to an erroneous cortical thickness measure in
that area. What I was interested in analising (if possible) is the
dispersi
what exactly do you mean? Spatial standard deviations? Usually those aren't
terribly interesting, and it's the cross subject ones that are more
useful, but that doesn't sound like what you mean.
Bruce
On Thu, 20 Sep 2007, Inês Souta wrote:
Hi there,
How can I get a standard deviation map o
Hi there,
How can I get a standard deviation map of the thickness measurements ina
subject?
Inês
___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
How did you compute the average? If using mri_glmfit, it will store an
rstd.mgh file with the stddev, you can load it like any other overlay.
doug
Inês Souta wrote:
Hello,
After computing the average thickness of an average subject (prior to
Qdec), how can I estimate and get a map of standa
Hello,
After computing the average thickness of an average subject (prior to Qdec),
how can I estimate and get a map of standard deviations of the thickness
measures across the subjects I've averaged.
Thanks,
Ines
___
Freesurfer mailing list
Freesurfer
