Re: [Freesurfer] warning after running mris_fwhm

2013-05-23 Thread Glen Lee
Thanks Doug. Yes, it works well now! -Glen On Thu, May 23, 2013 at 1:50 PM, Douglas N Greve wrote: > The second error just means that it cannot compute the fwhm. This will > go away if you add --smoooth-only. > > On 05/23/2013 01:31 PM, Glen Lee wrote: > > Hello FreeSurfer experts, > > > > I jus

Re: [Freesurfer] warning after running mris_fwhm

2013-05-23 Thread Douglas N Greve
The second error just means that it cannot compute the fwhm. This will go away if you add --smoooth-only. On 05/23/2013 01:31 PM, Glen Lee wrote: > Hello FreeSurfer experts, > > I just ran smoothing on a single 2D EPI image with a binary mask (that > excludes NaN vertices), but it didn't seem wo

[Freesurfer] warning after running mris_fwhm

2013-05-23 Thread Glen Lee
Hello FreeSurfer experts, I just ran smoothing on a single 2D EPI image with a binary mask (that excludes NaN vertices), but it didn't seem work out well as the output image (e.g., test.mgh) contains zero values throughout vertices. Also, I've got two warning messages (see below): while one of wh