Re: [Freesurfer] white matter errors due to inhomogeneities (bright spots) in cortex

2016-09-05 Thread Ruyuan Zhang
gh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu> Gesendet: Donnerstag, 1. September 2016 21:56:58 Betreff: [Freesurfer] white matter errors due to inhomogeneities (brightspots) in cortex Dear Freesurfer experts, We are currently working with some scans that were

Re: [Freesurfer] white matter errors due to inhomogeneities (bright spots) in cortex

2016-09-05 Thread Bruce Fischl
er@nmr.mgh.harvard.edu Gesendet: Donnerstag, 1. September 2016 21:56:58 Betreff: [Freesurfer] white matter errors due to inhomogeneities (bright        spots) in cortex Dear Freesurfer experts, We are currently working with some scans that were collected on a G

Re: [Freesurfer] white matter errors due to inhomogeneities (bright spots) in cortex

2016-09-05 Thread Benjamin Baird
ng to be perfect. > > Hope I could help. > Clara > > > - Ursprüngliche Mail - > Von: "Benjamin Baird" <benjamin.s.ba...@gmail.com> > An: freesurfer@nmr.mgh.harvard.edu > Gesendet: Donnerstag, 1. September 2016 21:56:58 > Betreff: [Freesurfer]

Re: [Freesurfer] white matter errors due to inhomogeneities (bright spots) in cortex

2016-09-02 Thread Benjamin Baird
mr.mgh.harvard.edu > Gesendet: Donnerstag, 1. September 2016 21:56:58 > Betreff: [Freesurfer] white matter errors due to inhomogeneities (bright > spots) in cortex > > Dear Freesurfer experts, > > We are currently working with some scans that were collected on a GE 3T

Re: [Freesurfer] white matter errors due to inhomogeneities (bright spots) in cortex

2016-09-02 Thread Clara Kühn
are just not going to be perfect. Hope I could help. Clara - Ursprüngliche Mail - Von: "Benjamin Baird" <benjamin.s.ba...@gmail.com> An: freesurfer@nmr.mgh.harvard.edu Gesendet: Donnerstag, 1. September 2016 21:56:58 Betreff: [Freesurfer] white matter errors due to inhomog

Re: [Freesurfer] white matter errors due to inhomogeneities (bright spots) in cortex

2016-09-01 Thread Bruce Fischl
Hi Ben are the bright points segmented as wm in the wm.mgz? If so, you might try erasing them and rerunning cheers Bruce On Wed, 31 Aug 2016, Benjamin Baird wrote: Dear Freesurfer experts, We are currently working with some scans that were collected on a GE 3T scanner. The goal is to