Hi Caspar
it changes some parameters to the intensity normalization and segmentation
to account for the lower SNR and increased CNR in the mprage. You'll need
to look in the recon-all script for the details
cheers
Bruce
On Thu, 30 May 2013, Caspar M. Schwiedrzik wrote:
Hi!
Is there more d
I only find flags for mri_normalize and mri_segment in recon-all, and I
have trouble reading the contents mri_normalize with a regular text editor.
caspar
2013/5/31 Bruce Fischl
> Hi Caspar
>
> it changes some parameters to the intensity normalization and segmentation
> to account for the lower
> St. Louis, MO 63110 Email: mha...@wustl.edu
>
> From: "Caspar M. Schwiedrzik"
> Date: Friday, May 31, 2013 2:14 PM
> To: "Freesurfer@nmr.mgh.harvard.edu"
> Subject: Re: [Freesurfer] mprage flag in recon-all
>
> I only find flags for mri_normali
chwiedrzik" <cschwie...@mail.rockefeller.edu>
Date: Friday, May 31, 2013 2:50 PM
To: "Harms, Michael" <mha...@wustl.edu>, "Freesurfer@nmr.mgh.harvard.edu" <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] mprage flag in recon-all
yes, but recon-all
mri_normalize is a binary so you can't, just recon-all.
On Fri, 31 May 2013, Caspar M. Schwiedrzik wrote:
I only find flags for mri_normalize and mri_segment in recon-all, and I have
trouble reading the contents mri_normalize with a regular text editor.
caspar
2013/5/31 Bruce Fischl
Hi
ay, May 31, 2013 2:14 PM
To: "Freesurfer@nmr.mgh.harvard.edu"
Subject: Re: [Freesurfer] mprage flag in recon-all
I only find flags for mri_normalize and mri_segment in recon-all, and
I have trouble reading the contents mri_normalize with a regular text
editor.
caspar
2013/5/31 Br
>> Conte Center for the Neuroscience of Mental Disorders
>> Washington University School of Medicine
>> Department of Psychiatry, Box 8134
>> 660 South Euclid Ave. Tel: 314-747-6173
>> St. Louis, MO 63110 Email: mha...@wustl.e
