It looks like the update didn't merge correctly and
shed_tool_data_table_conf.xml.sample (and potentially others, looking
at `hg diff run.sh` on a new instance, after updating to central's
tip) got left out of run.sh.
To fix this, you can update run.sh to include the files currently left out:
she
Thanks John! I'll give it a try. I can't get to that link, it says
"forbidden". Do you have another way to access the content?
What is the significance of the name 200_runners.py?
Thanks!
-Greg
On Thu, Mar 14, 2013 at 12:43 PM, John Chilton wrote:
> Greg,
>
> I think you can do this with dy
Hi Zeeshan,
There has actually been quite a bit of work on supporting CloudMan on
OpenStack. The whole NECTAR deployment in Australia is based on OpenStack.
What there has not been, as far as I know, is documentation about it.
I suggest creating a Trello card on this (see
http://wiki.galaxyproj
Hi Brad,
Thanks for reporting this issue.
I have confirmed that there is an issue with workflow parameter substitution
not working properly when inside of Grouping constructs (such as the paired
end/single end conditional). We've opened a Trello card
(https://trello.com/c/DvAea8kr) and Dannon
Hi Julien,
This was fixed in changeset 6cd4058d7b32
(https://bitbucket.org/galaxy/galaxy-dist/commits/6cd4058d7b32/). Can you
update your Galaxy instance and see if the issue is resolved for you?
Thanks for using Galaxy,
Dan
On Mar 20, 2013, at 4:53 AM, Julien SEILER wrote:
> Hello Carl,
>
Hello, Shaun
Which revision of galaxy-central or galaxy-dist are you using in your local
install?
Thanks,
Carl
On Wed, Mar 20, 2013 at 12:52 PM, Shaun Webb wrote:
>
> Hi Jen, I should have said this is in my own install. It works fine at the
> main server.
>
> I only noticed this as I was runn
Hello,
please could you help me, how to run galaxy directly from my computer? I am
using Bio-Linux (ubuntu distribution) and there is GALAXY already install.
When I try to open it, it is state that:
"The Galaxy server doesn't seem to be running on your machine. You may need
to start it w
Hey Brian,
Sorry for the delayed response on this one, what you're seeing is a
consequence of how Galaxy's tool migration scripts work -- all you
should need to do is click restart one more time in the cloudman admin
UI.
-Dannon
On Thu, Mar 14, 2013 at 10:56 PM, Brian Lin wrote:
> Hi guys, I'm
