Hi,
I don't want dowload the output files which Galaxy generates, because I
don't want to have them in double in my disk.
I saw, that the output files are in file_path an I found them.
But they have a .dat extension !
In your mailing-list archive I haven't found a solution to transform these
extens
> Is it possible to change this with a simple change in a configuration file or
> in a script file ?
No, they must be named as is for Galaxy to find them. You could, however,
create symbolic links to files and use an extension of your choice.
> Or, must I write my owner script, and if yes, how
Thank you Jeremy,
you answered partially. I would like insert a command, to launch my script,
in the script or in the xml files of my tools to force it to change the
extension of output files.
But it seems impossible because my command perl after the command of tool's
script doesn't work in xml fil
> Thank you Jeremy,
> you answered partially. I would like insert a command, to launch my script,
> in the script or in the xml files of my tools to force it to change the
> extension of output files.
> But it seems impossible because my command perl after the command of tool's
> script doesn't
On Thu, May 24, 2012 at 1:54 PM, Jeremy Goecks wrote:
>Julie wrote:
>> Thank you Jeremy,
>> you answered partially. I would like insert a command, to launch my script,
>> in the script or in the xml files of my tools to force it to change the
>> extension
>> of output files. But it seems impossib
Ok I've tried to add my script perl in the command line with semi-colon.
It's work
But this script sets in entry the variable $wigoutput of my file xml. But
when I show it, it's not what I want; It's just the value : 1 .
I think it's because the script of the application (macs) is called before
my
On Thu, May 24, 2012 at 3:27 PM, julie dubois wrote:
> Ok I've tried to add my script perl in the command line with semi-colon.
> It's work
> But this script sets in entry the variable $wigoutput of my file xml. But
> when I show it, it's not what I want; It's just the value : 1 .
> I think it's b
It works !!!
I've changed the extension of output file of an application.
But in Galaxy, it's referenced over the old file with .dat in history, so
if we want to re-use this file with other tool it's not the best way to
change this extension after the run of tool.
If I could change the extension be
